prepare a XenSPEP for ggplot2 visualization

ggprep_seg(xsce, xlim = c(5800, 6200), ylim = c(6300, 6700))

Arguments

xsce: XenSPEP instance
xlim: numeric(2)
ylim: numeric(2)

Value

a list with components `bounds` (data.frame including relevant colData rows (all colData variables) and cell boundary coordinates) and `txdata`, a filtered arrow Table.

Note

This is idiosyncratic. Quintiles of cell_area are produced, and transcript locations are filtered