Channing Network Medicine / Kubernetes at Landmark

Project Activities

This site summarizes ongoing development activities related to Kubernetes use for CDNM Landmark Data Group. Note: All resources on this page are under development.

Background

A recent DARPA paper may provide background and motivation.

Additionally, thanks to Sean Davis MD, PhD of NCI, the following links are of interest.

Data parallelism issues

Data parallelism concepts absent from R are addressed in Dask

To see how this might look in Kubernetes

Comments on Apache Spark

Another data abstraction that does have an implementation for R is Spark.

And see the last section in this blog post.

Comments on microservices

Discussion on organizing yaml