a GRanges with GWAS hits for outcomes mentioning "asthma"
amentgrGRanges
Produced on 21 Sept 2023 using `cc = gwascat::get_cached_gwascat()`, filtering using `grep("sthma", cc$MAPPED_TRAIT)` and removing records with missing `CHR_POS`.
data(amentgr)
amentgr[1:5,1:4]
#> GRanges object with 5 ranges and 4 metadata columns:
#> seqnames ranges strand | DATE.ADDED.TO.CATALOG PUBMEDID
#> <Rle> <IRanges> <Rle> | <Date> <numeric>
#> [1] 17 39909987 * | 2017-02-03 27439200
#> [2] 2 15780199 * | 2015-02-04 24993907
#> [3] 5 116261351 * | 2015-02-04 24993907
#> [4] 13 47269242 * | 2015-02-04 24993907
#> [5] 6 32636595 * | 2013-03-05 23181788
#> FIRST.AUTHOR DATE
#> <character> <Date>
#> [1] Nieuwenhuis MA 2016-07-20
#> [2] Smolonska J 2014-07-03
#> [3] Smolonska J 2014-07-03
#> [4] Smolonska J 2014-07-03
#> [5] Lasky-Su J 2012-12-04
#> -------
#> seqinfo: 23 sequences from GRCh38 genome; no seqlengths