constructor for PackageSet instances

PackageSet(cvec, biocversion = "3.16", branchname = "RELEASE_3_16")

Arguments

cvec: character() vector
biocversion: character(1) defaulting to "3.16"
branchname: character(1)

Note

Will issue message if some element of cvec is not found in BiocPkgTools::biocPkgList() result

Examples

ps = PackageSet(bioc_coreset())
#> Loading required namespace: BiocPkgTools
#> 'getOption("repos")' replaces Bioconductor standard repositories, see
#> '?repositories' for details
#> 
#> replacement repositories:
#>     CRAN: https://cloud.r-project.org
ps
#> BiocBBSpack PackageSet instance.
#>  There are 4 packages listed (Bioconductor version 3.16).
#>  There are 0 unique dependencies listed.
#>  Branch name: RELEASE_3_16
ps = add_dependencies(ps)
#> 'getOption("repos")' replaces Bioconductor standard repositories, see
#> '?repositories' for details
#> 
#> replacement repositories:
#>     CRAN: https://cloud.r-project.org
ps
#> BiocBBSpack PackageSet instance.
#>  There are 4 packages listed (Bioconductor version 3.16).
#>  There are 27 unique dependencies listed.
#>  Branch name: RELEASE_3_16