Sequence Ontology abbreviations and tags used with OpenCRAVAT

Sequence Ontology abbreviations and tags used with OpenCRAVAT

SO_map

Format

data.frame

Examples

head(SO_map)
#>     abbr                               term     SO_tag
#> PTR  PTR               processed_transcript SO:0001503
#> TU1  TU1 transcribed_unprocessed_pseudogene SO:0002107
#> UNP  UNP             unprocessed_pseudogene       <NA>
#> MIR  MIR                              miRNA SO:0000276
#> LNC  LNC                            lnc_RNA SO:0001877
#> PPS  PPS               processed_pseudogene SO:0000043