Sequence Ontology ingested from OBO

Sequence Ontology ingested from OBO

SO_onto

Format

ontologyIndex instance

Note

Ingested from so.obo at https://github.com/The-Sequence-Ontology/SO-Ontologies/Ontology_Files

Examples

head(names(SO_onto))
#> [1] "id"        "name"      "parents"   "children"  "ancestors" "obsolete" 
head(SO_onto$name)
#>                     SO:0000000                     SO:0000001 
#>            "Sequence_Ontology"                       "region" 
#>                     SO:0000002                     SO:0000003 
#> "sequence_secondary_structure"                    "G_quartet" 
#>                     SO:0000004                     SO:0000005 
#>         "interior_coding_exon"                "satellite_DNA"