make a gene ontology barplot over all variants
barplot_gene_ontology(
con,
kpev = c("EXP", "TAS", "IPI", "IDA", "IMP", "IGI"),
ont = c("MF", "BP"),
ncat = 15
)
Arguments
- con
SQLite connection to openCRAVAT .sqlite
- kpev
character() evidence codes to retain, defaulting to EXP, TAS, IPI, IDA, IMP, IGI
- ont
character() ontology codes to retain, defaulting to MF and BP
- ncat
numeric(1) maximum number of codes to report