check all columns for presence of symbol in a SE with ragged mutation matrix as assay

Source: R/mut_stuff.R

check all columns for presence of symbol in a SE with ragged mutation matrix as assay

has_mut_in(sym, se)

Arguments

sym

character(1) HUGO symbol

se

a SummarizedExperiment instance with ragged mutation matrix as assay

Value

a vector of logicals, one for each column; uses `

Examples

data(brcamutSE)
table(has_mut_in("TTN", brcamutSE))
#> 
#> FALSE  TRUE 
#>   787   190