List tables in a SemsqlConn database
Examples
goref <- semsql_connect(ontology = "go")
#> Connected to SemanticSQL database: /home/vincent/.cache/R/BiocFileCache/b24227f056f7_go.db
#> Primary ontology prefix: GO
list_tables(goref)
#> [1] "all_problems"
#> [2] "annotation_property_node"
#> [3] "anonymous_class_expression"
#> [4] "anonymous_expression"
#> [5] "anonymous_individual_expression"
#> [6] "anonymous_property_expression"
#> [7] "asymmetric_property_node"
#> [8] "axiom_dbxref_annotation"
#> [9] "blank_node"
#> [10] "class_node"
#> [11] "contributor"
#> [12] "count_of_instantiated_classes"
#> [13] "count_of_predicates"
#> [14] "count_of_subclasses"
#> [15] "creator"
#> [16] "deprecated_node"
#> [17] "edge"
#> [18] "entailed_edge"
#> [19] "entailed_edge_cycle"
#> [20] "entailed_edge_same_predicate_cycle"
#> [21] "entailed_subclass_of_edge"
#> [22] "entailed_type_edge"
#> [23] "has_broad_match_statement"
#> [24] "has_broad_synonym_statement"
#> [25] "has_dbxref_statement"
#> [26] "has_exact_match_statement"
#> [27] "has_exact_synonym_statement"
#> [28] "has_mapping_statement"
#> [29] "has_match_statement"
#> [30] "has_narrow_match_statement"
#> [31] "has_narrow_synonym_statement"
#> [32] "has_oio_synonym_statement"
#> [33] "has_related_match_statement"
#> [34] "has_related_synonym_statement"
#> [35] "has_synonym_statement"
#> [36] "has_text_definition_statement"
#> [37] "iri_node"
#> [38] "irreflexive_property_node"
#> [39] "lexical_problem"
#> [40] "named_individual_node"
#> [41] "node"
#> [42] "node_identifier"
#> [43] "node_to_node_statement"
#> [44] "node_to_value_statement"
#> [45] "node_with_two_labels_problem"
#> [46] "object_property_node"
#> [47] "ontology_node"
#> [48] "ontology_status_statement"
#> [49] "orcid"
#> [50] "owl_all_values_from"
#> [51] "owl_axiom"
#> [52] "owl_axiom_annotation"
#> [53] "owl_complement_of_statement"
#> [54] "owl_complex_axiom"
#> [55] "owl_disjoint_class_statement"
#> [56] "owl_equivalent_class_statement"
#> [57] "owl_equivalent_to_intersection_member"
#> [58] "owl_has_self"
#> [59] "owl_has_value"
#> [60] "owl_imports_statement"
#> [61] "owl_inverse_of_statement"
#> [62] "owl_reified_axiom"
#> [63] "owl_restriction"
#> [64] "owl_same_as_statement"
#> [65] "owl_some_values_from"
#> [66] "owl_subclass_of_some_values_from"
#> [67] "prefix"
#> [68] "problem"
#> [69] "property_node"
#> [70] "property_used_with_datatype_values_and_objects"
#> [71] "rdf_first_statement"
#> [72] "rdf_level_summary_statistic"
#> [73] "rdf_list_member_statement"
#> [74] "rdf_list_node"
#> [75] "rdf_list_statement"
#> [76] "rdf_rest_statement"
#> [77] "rdf_rest_transitive_statement"
#> [78] "rdf_type_statement"
#> [79] "rdfs_domain_statement"
#> [80] "rdfs_label_statement"
#> [81] "rdfs_range_statement"
#> [82] "rdfs_subclass_of_named_statement"
#> [83] "rdfs_subclass_of_statement"
#> [84] "rdfs_subproperty_of_statement"
#> [85] "reflexive_property_node"
#> [86] "relation_graph_construct"
#> [87] "repair_action"
#> [88] "statements"
#> [89] "subgraph_edge_by_ancestor"
#> [90] "subgraph_edge_by_ancestor_or_descendant"
#> [91] "subgraph_edge_by_child"
#> [92] "subgraph_edge_by_descendant"
#> [93] "subgraph_edge_by_parent"
#> [94] "subgraph_edge_by_self"
#> [95] "subgraph_query"
#> [96] "symmetric_property_node"
#> [97] "term_association"
#> [98] "trailing_whitespace_problem"
#> [99] "transitive_edge"
#> [100] "transitive_property_node"
disconnect(goref)
#> Disconnected from 'b24227f056f7_go.db'